All Classes
AbstractDistribution
AbstractLaunchable
AbstractSeqAlgorithm
AlgorithmRun
Approximation
Approximation.Strategy
Configuration
ContentPartitionRule
CrossValidation
DecrementalEMAlgorithm
Distribution
DistributionUtils
DSSPReader
EMAlgorithm
EMInc
EmpiricalDistribution
EMSelectionMethod
Env
Env.ObjInputStream
FallthruAlgorithm
FallthruChain
FilterTask
Fragment
FragmentFactory
FragmentSet
FragmentSetWrapper
GenbankReader
GeneticAlgorithm
GeneViterbiAlgorithm
GeometricDistribution
IncrementalEMAlgorithm
JobListener
LabelFilter
Launchable
LengthFilter
MarkovChain
MarkovMixture
Messages
Mixture
MixtureAlgorithm
MixtureFilter
MixtureWeights
NamedSequenceSet
Organism
Partition
PartitionRule
PartitionRuleTree
PredictionQuality
Print
PrintEnv
PriorityCompAlgorithm
QualityEstimation
RandomFilter
Representable
ResourceBundleUtils
RuleAddAlgorithm
RuleEntropy
RuleGeneticAlgorithm
RuleTreeGenerator
RuleTreeGenerator.Fitness
Run
RunCollection
SeqAlgorithm
Sequence
SequenceSet
SequenceSet.Filter
SequenceUtils
SimpleSequenceSet
SwitchAlgorithm
ThreadedAlgorithm
ThreadedDistribution
Trainable
TreeGen
TreeSwitchAlgorithm
ValidGenesFilter
ViterbiAlgorithm